TimeSeries¶
- class astropy.timeseries.TimeSeries(data=None, *, time=None, time_start=None, time_delta=None, n_samples=None, **kwargs)[source]¶
Bases:
BaseTimeSeriesA class to represent time series data in tabular form.
TimeSeriesprovides a class for representing time series as a collection of values of different quantities measured at specific points in time (for time series with finite time bins, see theBinnedTimeSeriesclass).TimeSeriesis a sub-class ofQTableand thus provides all the standard table maniplation methods available to tables, but it also provides additional conveniences for dealing with time series, such as a flexible initializer for setting up the times, a method for folding time series, and atimeattribute for easy access to the time values.See also: https://docs.astropy.org/en/stable/timeseries/
- Parameters:
- data
numpyndarray,dict,list,Table, or astropy:table-likeobject, optional Data to initialize time series. This does not need to contain the times, which can be provided separately, but if it does contain the times they should be in a column called
'time'to be automatically recognized.- time
Time,TimeDeltaor iterable The times at which the values are sampled - this can be either given directly as a
TimeorTimeDeltaarray or as any iterable that initializes theTimeclass. If this is given, then the remaining time-related arguments should not be used.- time_start
Timeorstr The time of the first sample in the time series. This is an alternative to providing
timeand requires thattime_deltais also provided.- time_delta
TimeDeltaorQuantity[:ref: ‘time’] The step size in time for the series. This can either be a scalar if the time series is evenly sampled, or an array of values if it is not.
- n_samples
int The number of time samples for the series. This is only used if both
time_startandtime_deltaare provided and are scalar values.- **kwargs
dict, optional Additional keyword arguments are passed to
QTable.
- data
Attributes Summary
True if table has any
MaskedColumncolumns.True if column in the table has values which are masked.
True if table has any mixin columns (defined as columns that are not Column subclasses).
Return a TableILoc object that can be used for retrieving indexed rows in the order they appear in the index.
Return the indices associated with columns of the table as a TableIndices object.
Return a TableLoc object that can be used for retrieving rows by index in a given data range.
Return a TableLocIndices object that can be used for retrieving the row indices corresponding to given table index key value or values.
Maintain tuple that controls table column visibility for print output.
Maintain tuple that controls table column visibility for print output.
The time values.
Write this Table object out in the specified format.
Methods Summary
add_column(*args, **kwargs)See
add_column().add_columns(*args, **kwargs)See
add_columns().add_index(colnames[, engine, unique])Insert a new index among one or more columns.
add_row([vals, mask])Add a new row to the end of the table.
argsort([keys, kind, reverse])Return the indices which would sort the table according to one or more key columns.
as_array([keep_byteorder, names])Return a new copy of the table in the form of a structured np.ndarray or np.ma.MaskedArray object (as appropriate).
Convert bytestring columns (dtype.kind='S') to unicode (dtype.kind='U') using UTF-8 encoding.
Convert unicode columns (dtype.kind='U') to bytestring (dtype.kind='S') using UTF-8 encoding.
copy([copy_data])Return a copy of the table.
field(item)Return column[item] for recarray compatibility.
filled([fill_value])Return copy of self, with masked values filled.
fold([period, epoch_time, epoch_phase, ...])Return a new
TimeSeriesfolded with a period and epoch.from_pandas(df[, time_scale])Convert a
DataFrameto aastropy.timeseries.TimeSeries.group_by(keys)Group this table by the specified
keys.index_column(name)Return the positional index of column
name.index_mode(mode)Return a context manager for an indexing mode.
insert_row(index[, vals, mask])Add a new row before the given
indexposition in the table.items()itercols()Iterate over the columns of this table.
iterrows(*names)Iterate over rows of table returning a tuple of values for each row.
keep_columns(names)Keep only the columns specified (remove the others).
keys()more([max_lines, max_width, show_name, ...])Interactively browse table with a paging interface.
pformat([max_lines, max_width, show_name, ...])Return a list of lines for the formatted string representation of
pformat_all([max_lines, max_width, ...])Return a list of lines for the formatted string representation of
pprint([max_lines, max_width, show_name, ...])Print a formatted string representation of the table.
pprint_all([max_lines, max_width, ...])Print a formatted string representation of the entire table.
read(filename[, time_column, time_format, ...])Read and parse a file and returns a
astropy.timeseries.TimeSeries.remove_column(name)Remove a column from the table.
remove_columns(names)Remove several columns from the table.
remove_indices(colname)Remove all indices involving the given column.
remove_row(index)Remove a row from the table.
remove_rows(row_specifier)Remove rows from the table.
rename_column(name, new_name)Rename a column.
rename_columns(names, new_names)Rename multiple columns.
replace_column(name, col[, copy])Replace column
namewith the newcolobject.reverse()Reverse the row order of table rows.
round([decimals])Round numeric columns in-place to the specified number of decimals.
show_in_browser([max_lines, jsviewer, ...])Render the table in HTML and show it in a web browser.
show_in_notebook([tableid, css, ...])Render the table in HTML and show it in the IPython notebook.
sort([keys, kind, reverse])Sort the table according to one or more keys.
Convert this
TimeSeriesto aDataFramewith aDatetimeIndexindex.update(other[, copy])Perform a dictionary-style update and merge metadata.
values()values_equal(other)Element-wise comparison of table with another table, list, or scalar.
Attributes Documentation
- ColumnClass¶
- colnames¶
- dtype¶
- groups¶
- has_masked_columns¶
True if table has any
MaskedColumncolumns.This does not check for mixin columns that may have masked values, use the
has_masked_valuesproperty in that case.
- has_masked_values¶
True if column in the table has values which are masked.
This may be relatively slow for large tables as it requires checking the mask values of each column.
- has_mixin_columns¶
True if table has any mixin columns (defined as columns that are not Column subclasses).
- iloc¶
Return a TableILoc object that can be used for retrieving indexed rows in the order they appear in the index.
- indices¶
Return the indices associated with columns of the table as a TableIndices object.
- info¶
- loc¶
Return a TableLoc object that can be used for retrieving rows by index in a given data range. Note that both loc and iloc work only with single-column indices.
- loc_indices¶
Return a TableLocIndices object that can be used for retrieving the row indices corresponding to given table index key value or values.
- mask¶
- masked¶
- meta¶
- pprint_exclude_names¶
Maintain tuple that controls table column visibility for print output.
This is a descriptor that inherits from MetaAttribute so that the attribute value is stored in the table meta[‘__attributes__’].
This gets used for the
pprint_include_namesandpprint_exclude_namesTable attributes.
- pprint_include_names¶
Maintain tuple that controls table column visibility for print output.
This is a descriptor that inherits from MetaAttribute so that the attribute value is stored in the table meta[‘__attributes__’].
This gets used for the
pprint_include_namesandpprint_exclude_namesTable attributes.
- time¶
The time values.
- write¶
Write this Table object out in the specified format.
This function provides the Table interface to the astropy unified I/O layer. This allows easily writing a file in many supported data formats using syntax such as:
>>> from astropy.table import Table >>> dat = Table([[1, 2], [3, 4]], names=('a', 'b')) >>> dat.write('table.dat', format='ascii')
Get help on the available writers for
Tableusing the``help()`` method:>>> Table.write.help() # Get help writing Table and list supported formats >>> Table.write.help('fits') # Get detailed help on Table FITS writer >>> Table.write.list_formats() # Print list of available formats
The
serialize_methodargument is explained in the section on Table serialization methods.See also: https://docs.astropy.org/en/stable/io/unified.html
- Parameters:
- *args
tuple, optional Positional arguments passed through to data writer. If supplied the first argument is the output filename.
- format
str File format specifier.
- serialize_method
str,dict, optional Serialization method specifier for columns.
- **kwargs
dict, optional Keyword arguments passed through to data writer.
- *args
Methods Documentation
- add_column(*args, **kwargs)[source]¶
See
add_column().
- add_columns(*args, **kwargs)[source]¶
See
add_columns().
- add_index(colnames, engine=None, unique=False)¶
Insert a new index among one or more columns. If there are no indices, make this index the primary table index.
- Parameters:
- colnames
strorlist List of column names (or a single column name) to index
- enginetype or
None Indexing engine class to use, either
SortedArray,BST, orSCEngine. If the supplied argument is None (by default), useSortedArray.- uniquebool
Whether the values of the index must be unique. Default is False.
- colnames
- add_row(vals=None, mask=None)¶
Add a new row to the end of the table.
The
valsargument can be:- sequence (e.g. tuple or list)
Column values in the same order as table columns.
- mapping (e.g. dict)
Keys corresponding to column names. Missing values will be filled with np.zeros for the column dtype.
NoneAll values filled with np.zeros for the column dtype.
This method requires that the Table object “owns” the underlying array data. In particular one cannot add a row to a Table that was initialized with copy=False from an existing array.
The
maskattribute should give (if desired) the mask for the values. The type of the mask should match that of the values, i.e. ifvalsis an iterable, thenmaskshould also be an iterable with the same length, and ifvalsis a mapping, thenmaskshould be a dictionary.- Parameters:
Examples
Create a table with three columns ‘a’, ‘b’ and ‘c’:
>>> t = Table([[1,2],[4,5],[7,8]], names=('a','b','c')) >>> print(t) a b c --- --- --- 1 4 7 2 5 8
Adding a new row with entries ‘3’ in ‘a’, ‘6’ in ‘b’ and ‘9’ in ‘c’:
>>> t.add_row([3,6,9]) >>> print(t) a b c --- --- --- 1 4 7 2 5 8 3 6 9
- argsort(keys=None, kind=None, reverse=False)¶
Return the indices which would sort the table according to one or more key columns. This simply calls the
numpy.argsortfunction on the table with theorderparameter set tokeys.- Parameters:
- Returns:
- as_array(keep_byteorder=False, names=None)¶
Return a new copy of the table in the form of a structured np.ndarray or np.ma.MaskedArray object (as appropriate).
- Parameters:
- keep_byteorderbool, optional
By default the returned array has all columns in native byte order. However, if this option is
Truethis preserves the byte order of all columns (if any are non-native).- names
list, optional: List of column names to include for returned structured array. Default is to include all table columns.
- Returns:
- table_array
arrayorMaskedArray Copy of table as a numpy structured array. ndarray for unmasked or
MaskedArrayfor masked.
- table_array
- convert_bytestring_to_unicode()¶
Convert bytestring columns (dtype.kind=’S’) to unicode (dtype.kind=’U’) using UTF-8 encoding.
Internally this changes string columns to represent each character in the string with a 4-byte UCS-4 equivalent, so it is inefficient for memory but allows scripts to manipulate string arrays with natural syntax.
- convert_unicode_to_bytestring()¶
Convert unicode columns (dtype.kind=’U’) to bytestring (dtype.kind=’S’) using UTF-8 encoding.
When exporting a unicode string array to a file, it may be desirable to encode unicode columns as bytestrings.
- copy(copy_data=True)¶
Return a copy of the table.
- field(item)¶
Return column[item] for recarray compatibility.
- filled(fill_value=None)¶
Return copy of self, with masked values filled.
If input
fill_valuesupplied then that value is used for all masked entries in the table. Otherwise the individualfill_valuedefined for each table column is used.
- fold(period=None, epoch_time=None, epoch_phase=0, wrap_phase=None, normalize_phase=False)[source]¶
Return a new
TimeSeriesfolded with a period and epoch.- Parameters:
- period
Quantity[:ref: ‘time’] The period to use for folding
- epoch_time
Time The time to use as the reference epoch, at which the relative time offset / phase will be
epoch_phase. Defaults to the first time in the time series.- epoch_phase
floatorQuantity[:ref: ‘dimensionless’, :ref: ‘time’] Phase of
epoch_time. Ifnormalize_phaseisTrue, this should be a dimensionless value, while ifnormalize_phaseisFalse, this should be aQuantitywith time units. Defaults to 0.- wrap_phase
floatorQuantity[:ref: ‘dimensionless’, :ref: ‘time’] The value of the phase above which values are wrapped back by one period. If
normalize_phaseisTrue, this should be a dimensionless value, while ifnormalize_phaseisFalse, this should be aQuantitywith time units. Defaults to half the period, so that the resulting time series goes from-period / 2toperiod / 2(ifnormalize_phaseisFalse) or -0.5 to 0.5 (ifnormalize_phaseisTrue).- normalize_phasebool
If
Falsephase is returned asTimeDelta, otherwise as a dimensionlessQuantity.
- period
- Returns:
- folded_timeseries
TimeSeries The folded time series object with phase as the
timecolumn.
- folded_timeseries
- classmethod from_pandas(df, time_scale='utc')[source]¶
Convert a
DataFrameto aastropy.timeseries.TimeSeries.- Parameters:
- df
pandas.DataFrame A pandas
pandas.DataFrameinstance.- time_scale
str The time scale to pass into
astropy.time.Time. Defaults toUTC.
- df
- group_by(keys)¶
Group this table by the specified
keys.This effectively splits the table into groups which correspond to unique values of the
keysgrouping object. The output is a newTableGroupswhich contains a copy of this table but sorted by row according tokeys.The
keysinput togroup_bycan be specified in different ways:String or list of strings corresponding to table column name(s)
Numpy array (homogeneous or structured) with same length as this table
Tablewith same length as this table
- index_column(name)¶
Return the positional index of column
name.Examples
Create a table with three columns ‘a’, ‘b’ and ‘c’:
>>> t = Table([[1, 2, 3], [0.1, 0.2, 0.3], ['x', 'y', 'z']], ... names=('a', 'b', 'c')) >>> print(t) a b c --- --- --- 1 0.1 x 2 0.2 y 3 0.3 z
Get index of column ‘b’ of the table:
>>> t.index_column('b') 1
- index_mode(mode)¶
Return a context manager for an indexing mode.
- Parameters:
- mode
str Either ‘freeze’, ‘copy_on_getitem’, or ‘discard_on_copy’. In ‘discard_on_copy’ mode, indices are not copied whenever columns or tables are copied. In ‘freeze’ mode, indices are not modified whenever columns are modified; at the exit of the context, indices refresh themselves based on column values. This mode is intended for scenarios in which one intends to make many additions or modifications in an indexed column. In ‘copy_on_getitem’ mode, indices are copied when taking column slices as well as table slices, so col[i0:i1] will preserve indices.
- mode
- insert_row(index, vals=None, mask=None)¶
Add a new row before the given
indexposition in the table.The
valsargument can be:- sequence (e.g. tuple or list)
Column values in the same order as table columns.
- mapping (e.g. dict)
Keys corresponding to column names. Missing values will be filled with np.zeros for the column dtype.
NoneAll values filled with np.zeros for the column dtype.
The
maskattribute should give (if desired) the mask for the values. The type of the mask should match that of the values, i.e. ifvalsis an iterable, thenmaskshould also be an iterable with the same length, and ifvalsis a mapping, thenmaskshould be a dictionary.
- items()¶
- itercols()¶
Iterate over the columns of this table.
Examples
To iterate over the columns of a table:
>>> t = Table([[1], [2]]) >>> for col in t.itercols(): ... print(col) col0 ---- 1 col1 ---- 2
Using
itercols()is similar tofor col in t.columns.values()but is syntactically preferred.
- iterrows(*names)¶
Iterate over rows of table returning a tuple of values for each row.
This method is especially useful when only a subset of columns are needed.
The
iterrowsmethod can be substantially faster than using the standard Table row iteration (e.g.for row in tbl:), since that returns a new~astropy.table.Rowobject for each row and accessing a column in that row (e.g.row['col0']) is slower than tuple access.- Parameters:
- names
list List of column names (default to all columns if no names provided)
- names
- Returns:
- rowsiterable
Iterator returns tuples of row values
Examples
Create a table with three columns ‘a’, ‘b’ and ‘c’:
>>> t = Table({'a': [1, 2, 3], ... 'b': [1.0, 2.5, 3.0], ... 'c': ['x', 'y', 'z']})
To iterate row-wise using column names:
>>> for a, c in t.iterrows('a', 'c'): ... print(a, c) 1 x 2 y 3 z
- keep_columns(names)¶
Keep only the columns specified (remove the others).
Examples
Create a table with three columns ‘a’, ‘b’ and ‘c’:
>>> t = Table([[1, 2, 3],[0.1, 0.2, 0.3],['x', 'y', 'z']], ... names=('a', 'b', 'c')) >>> print(t) a b c --- --- --- 1 0.1 x 2 0.2 y 3 0.3 z
Keep only column ‘a’ of the table:
>>> t.keep_columns('a') >>> print(t) a --- 1 2 3
Keep columns ‘a’ and ‘c’ of the table:
>>> t = Table([[1, 2, 3],[0.1, 0.2, 0.3],['x', 'y', 'z']], ... names=('a', 'b', 'c')) >>> t.keep_columns(['a', 'c']) >>> print(t) a c --- --- 1 x 2 y 3 z
- keys()¶
- more(max_lines=None, max_width=None, show_name=True, show_unit=None, show_dtype=False)¶
Interactively browse table with a paging interface.
Supported keys:
f, <space> : forward one page b : back one page r : refresh same page n : next row p : previous row < : go to beginning > : go to end q : quit browsing h : print this help
- Parameters:
- max_lines
int Maximum number of lines in table output
- max_width
intorNone Maximum character width of output
- show_namebool
Include a header row for column names. Default is True.
- show_unitbool
Include a header row for unit. Default is to show a row for units only if one or more columns has a defined value for the unit.
- show_dtypebool
Include a header row for column dtypes. Default is False.
- max_lines
- pformat(max_lines=None, max_width=None, show_name=True, show_unit=None, show_dtype=False, html=False, tableid=None, align=None, tableclass=None)¶
- Return a list of lines for the formatted string representation of
the table.
If no value of
max_linesis supplied then the height of the screen terminal is used to setmax_lines. If the terminal height cannot be determined then the default is taken from the configuration itemastropy.conf.max_lines. If a negative value ofmax_linesis supplied then there is no line limit applied.The same applies for
max_widthexcept the configuration item isastropy.conf.max_width.
- Parameters:
- max_lines
intorNone Maximum number of rows to output
- max_width
intorNone Maximum character width of output
- show_namebool
Include a header row for column names. Default is True.
- show_unitbool
Include a header row for unit. Default is to show a row for units only if one or more columns has a defined value for the unit.
- show_dtypebool
Include a header row for column dtypes. Default is True.
- htmlbool
Format the output as an HTML table. Default is False.
- tableid
strorNone An ID tag for the table; only used if html is set. Default is “table{id}”, where id is the unique integer id of the table object, id(self)
- align
strorlistortupleorNone Left/right alignment of columns. Default is right (None) for all columns. Other allowed values are ‘>’, ‘<’, ‘^’, and ‘0=’ for right, left, centered, and 0-padded, respectively. A list of strings can be provided for alignment of tables with multiple columns.
- tableclass
strorlistofstrorNone CSS classes for the table; only used if html is set. Default is None.
- max_lines
- Returns:
- lines
list Formatted table as a list of strings.
- lines
- pformat_all(max_lines=-1, max_width=-1, show_name=True, show_unit=None, show_dtype=False, html=False, tableid=None, align=None, tableclass=None)¶
- Return a list of lines for the formatted string representation of
the entire table.
If no value of
max_linesis supplied then the height of the screen terminal is used to setmax_lines. If the terminal height cannot be determined then the default is taken from the configuration itemastropy.conf.max_lines. If a negative value ofmax_linesis supplied then there is no line limit applied.The same applies for
max_widthexcept the configuration item isastropy.conf.max_width.
- Parameters:
- max_lines
intorNone Maximum number of rows to output
- max_width
intorNone Maximum character width of output
- show_namebool
Include a header row for column names. Default is True.
- show_unitbool
Include a header row for unit. Default is to show a row for units only if one or more columns has a defined value for the unit.
- show_dtypebool
Include a header row for column dtypes. Default is True.
- htmlbool
Format the output as an HTML table. Default is False.
- tableid
strorNone An ID tag for the table; only used if html is set. Default is “table{id}”, where id is the unique integer id of the table object, id(self)
- align
strorlistortupleorNone Left/right alignment of columns. Default is right (None) for all columns. Other allowed values are ‘>’, ‘<’, ‘^’, and ‘0=’ for right, left, centered, and 0-padded, respectively. A list of strings can be provided for alignment of tables with multiple columns.
- tableclass
strorlistofstrorNone CSS classes for the table; only used if html is set. Default is None.
- max_lines
- Returns:
- lines
list Formatted table as a list of strings.
- lines
- pprint(max_lines=None, max_width=None, show_name=True, show_unit=None, show_dtype=False, align=None)¶
Print a formatted string representation of the table.
If no value of
max_linesis supplied then the height of the screen terminal is used to setmax_lines. If the terminal height cannot be determined then the default is taken from the configuration itemastropy.conf.max_lines. If a negative value ofmax_linesis supplied then there is no line limit applied.The same applies for max_width except the configuration item is
astropy.conf.max_width.- Parameters:
- max_lines
intorNone Maximum number of lines in table output.
- max_width
intorNone Maximum character width of output.
- show_namebool
Include a header row for column names. Default is True.
- show_unitbool
Include a header row for unit. Default is to show a row for units only if one or more columns has a defined value for the unit.
- show_dtypebool
Include a header row for column dtypes. Default is False.
- align
strorlistortupleorNone Left/right alignment of columns. Default is right (None) for all columns. Other allowed values are ‘>’, ‘<’, ‘^’, and ‘0=’ for right, left, centered, and 0-padded, respectively. A list of strings can be provided for alignment of tables with multiple columns.
- max_lines
- pprint_all(max_lines=-1, max_width=-1, show_name=True, show_unit=None, show_dtype=False, align=None)¶
Print a formatted string representation of the entire table.
This method is the same as
astropy.table.Table.pprintexcept that the defaultmax_linesandmax_widthare both -1 so that by default the entire table is printed instead of restricting to the size of the screen terminal.- Parameters:
- max_lines
intorNone Maximum number of lines in table output.
- max_width
intorNone Maximum character width of output.
- show_namebool
Include a header row for column names. Default is True.
- show_unitbool
Include a header row for unit. Default is to show a row for units only if one or more columns has a defined value for the unit.
- show_dtypebool
Include a header row for column dtypes. Default is False.
- align
strorlistortupleorNone Left/right alignment of columns. Default is right (None) for all columns. Other allowed values are ‘>’, ‘<’, ‘^’, and ‘0=’ for right, left, centered, and 0-padded, respectively. A list of strings can be provided for alignment of tables with multiple columns.
- max_lines
- classmethod read(filename, time_column=None, time_format=None, time_scale=None, format=None, *args, **kwargs)[source]¶
Read and parse a file and returns a
astropy.timeseries.TimeSeries.This method uses the unified I/O infrastructure in Astropy which makes it easy to define readers/writers for various classes (https://docs.astropy.org/en/stable/io/unified.html). By default, this method will try and use readers defined specifically for the
astropy.timeseries.TimeSeriesclass - however, it is also possible to use theformatkeyword to specify formats defined for theastropy.table.Tableclass - in this case, you will need to also provide the column names for column containing the start times for the bins, as well as other column names (see the Parameters section below for details):>>> from astropy.timeseries import TimeSeries >>> ts = TimeSeries.read('sampled.dat', format='ascii.ecsv', ... time_column='date')
- Parameters:
- filename
str File to parse.
- format
str File format specifier.
- time_column
str, optional The name of the time column.
- time_format
str, optional The time format for the time column.
- time_scale
str, optional The time scale for the time column.
- *args
tuple, optional Positional arguments passed through to the data reader.
- **kwargs
dict, optional Keyword arguments passed through to the data reader.
- filename
- Returns:
- out
astropy.timeseries.sampled.TimeSeries TimeSeries corresponding to file contents.
- out
Notes
The available built-in formats are:
Format
Read
Write
Auto-identify
kepler.fits
Yes
No
No
tess.fits
Yes
No
No
- remove_column(name)¶
Remove a column from the table.
This can also be done with:
del table[name]
- Parameters:
- name
str Name of column to remove
- name
Examples
Create a table with three columns ‘a’, ‘b’ and ‘c’:
>>> t = Table([[1, 2, 3], [0.1, 0.2, 0.3], ['x', 'y', 'z']], ... names=('a', 'b', 'c')) >>> print(t) a b c --- --- --- 1 0.1 x 2 0.2 y 3 0.3 z
Remove column ‘b’ from the table:
>>> t.remove_column('b') >>> print(t) a c --- --- 1 x 2 y 3 z
To remove several columns at the same time use remove_columns.
- remove_columns(names)¶
Remove several columns from the table.
Examples
Create a table with three columns ‘a’, ‘b’ and ‘c’:
>>> t = Table([[1, 2, 3], [0.1, 0.2, 0.3], ['x', 'y', 'z']], ... names=('a', 'b', 'c')) >>> print(t) a b c --- --- --- 1 0.1 x 2 0.2 y 3 0.3 z
Remove columns ‘b’ and ‘c’ from the table:
>>> t.remove_columns(['b', 'c']) >>> print(t) a --- 1 2 3
Specifying only a single column also works. Remove column ‘b’ from the table:
>>> t = Table([[1, 2, 3], [0.1, 0.2, 0.3], ['x', 'y', 'z']], ... names=('a', 'b', 'c')) >>> t.remove_columns('b') >>> print(t) a c --- --- 1 x 2 y 3 z
This gives the same as using remove_column.
- remove_indices(colname)¶
Remove all indices involving the given column. If the primary index is removed, the new primary index will be the most recently added remaining index.
- Parameters:
- colname
str Name of column
- colname
- remove_row(index)¶
Remove a row from the table.
- Parameters:
- index
int Index of row to remove
- index
Examples
Create a table with three columns ‘a’, ‘b’ and ‘c’:
>>> t = Table([[1, 2, 3], [0.1, 0.2, 0.3], ['x', 'y', 'z']], ... names=('a', 'b', 'c')) >>> print(t) a b c --- --- --- 1 0.1 x 2 0.2 y 3 0.3 z
Remove row 1 from the table:
>>> t.remove_row(1) >>> print(t) a b c --- --- --- 1 0.1 x 3 0.3 z
To remove several rows at the same time use remove_rows.
- remove_rows(row_specifier)¶
Remove rows from the table.
Examples
Create a table with three columns ‘a’, ‘b’ and ‘c’:
>>> t = Table([[1, 2, 3], [0.1, 0.2, 0.3], ['x', 'y', 'z']], ... names=('a', 'b', 'c')) >>> print(t) a b c --- --- --- 1 0.1 x 2 0.2 y 3 0.3 z
Remove rows 0 and 2 from the table:
>>> t.remove_rows([0, 2]) >>> print(t) a b c --- --- --- 2 0.2 y
Note that there are no warnings if the slice operator extends outside the data:
>>> t = Table([[1, 2, 3], [0.1, 0.2, 0.3], ['x', 'y', 'z']], ... names=('a', 'b', 'c')) >>> t.remove_rows(slice(10, 20, 1)) >>> print(t) a b c --- --- --- 1 0.1 x 2 0.2 y 3 0.3 z
- rename_column(name, new_name)¶
Rename a column.
This can also be done directly by setting the
nameattribute of theinfoproperty of the column:table[name].info.name = new_name
Examples
Create a table with three columns ‘a’, ‘b’ and ‘c’:
>>> t = Table([[1,2],[3,4],[5,6]], names=('a','b','c')) >>> print(t) a b c --- --- --- 1 3 5 2 4 6
Renaming column ‘a’ to ‘aa’:
>>> t.rename_column('a' , 'aa') >>> print(t) aa b c --- --- --- 1 3 5 2 4 6
- rename_columns(names, new_names)¶
Rename multiple columns.
- Parameters:
Examples
Create a table with three columns ‘a’, ‘b’, ‘c’:
>>> t = Table([[1,2],[3,4],[5,6]], names=('a','b','c')) >>> print(t) a b c --- --- --- 1 3 5 2 4 6
Renaming columns ‘a’ to ‘aa’ and ‘b’ to ‘bb’:
>>> names = ('a','b') >>> new_names = ('aa','bb') >>> t.rename_columns(names, new_names) >>> print(t) aa bb c --- --- --- 1 3 5 2 4 6
- replace_column(name, col, copy=True)¶
Replace column
namewith the newcolobject.The behavior of
copyfor Column objects is: - copy=True: new class instance with a copy of data and deep copy of meta - copy=False: new class instance with same data and a key-only copy of metaFor mixin columns: - copy=True: new class instance with copy of data and deep copy of meta - copy=False: original instance (no copy at all)
- Parameters:
See also
Examples
Replace column ‘a’ with a float version of itself:
>>> t = Table([[1, 2, 3], [0.1, 0.2, 0.3]], names=('a', 'b')) >>> float_a = t['a'].astype(float) >>> t.replace_column('a', float_a)
- reverse()¶
Reverse the row order of table rows. The table is reversed in place and there are no function arguments.
Examples
Create a table with three columns:
>>> t = Table([['Max', 'Jo', 'John'], ['Miller','Miller','Jackson'], ... [12,15,18]], names=('firstname','name','tel')) >>> print(t) firstname name tel --------- ------- --- Max Miller 12 Jo Miller 15 John Jackson 18
Reversing order:
>>> t.reverse() >>> print(t) firstname name tel --------- ------- --- John Jackson 18 Jo Miller 15 Max Miller 12
- round(decimals=0)¶
Round numeric columns in-place to the specified number of decimals. Non-numeric columns will be ignored.
- Parameters:
- decimals: int, dict
Number of decimals to round the columns to. If a dict is given, the columns will be rounded to the number specified as the value. If a certain column is not in the dict given, it will remain the same.
Examples
Create three columns with different types:
>>> t = Table([[1, 4, 5], [-25.55, 12.123, 85], ... ['a', 'b', 'c']], names=('a', 'b', 'c')) >>> print(t) a b c --- ------ --- 1 -25.55 a 4 12.123 b 5 85.0 c
Round them all to 0:
>>> t.round(0) >>> print(t) a b c --- ----- --- 1 -26.0 a 4 12.0 b 5 85.0 c
Round column ‘a’ to -1 decimal:
>>> t.round({'a':-1}) >>> print(t) a b c --- ----- --- 0 -26.0 a 0 12.0 b 0 85.0 c
- show_in_browser(max_lines=5000, jsviewer=False, browser='default', jskwargs={'use_local_files': True}, tableid=None, table_class='display compact', css=None, show_row_index='idx')¶
Render the table in HTML and show it in a web browser.
- Parameters:
- max_lines
int Maximum number of rows to export to the table (set low by default to avoid memory issues, since the browser view requires duplicating the table in memory). A negative value of
max_linesindicates no row limit.- jsviewerbool
If
True, prepends some javascript headers so that the table is rendered as a DataTables data table. This allows in-browser searching & sorting.- browser
str Any legal browser name, e.g.
'firefox','chrome','safari'(for mac, you may need to use'open -a "/Applications/Google Chrome.app" {}'for Chrome). If'default', will use the system default browser.- jskwargs
dict Passed to the
astropy.table.JSViewerinit. Defaults to{'use_local_files': True}which means that the JavaScript libraries will be served from local copies.- tableid
strorNone An html ID tag for the table. Default is
table{id}, where id is the unique integer id of the table object, id(self).- table_class
strorNone A string with a list of HTML classes used to style the table. Default is “display compact”, and other possible values can be found in https://www.datatables.net/manual/styling/classes
- css
str A valid CSS string declaring the formatting for the table. Defaults to
astropy.table.jsviewer.DEFAULT_CSS.- show_row_index
strorFalse If this does not evaluate to False, a column with the given name will be added to the version of the table that gets displayed. This new column shows the index of the row in the table itself, even when the displayed table is re-sorted by another column. Note that if a column with this name already exists, this option will be ignored. Defaults to “idx”.
- max_lines
- show_in_notebook(tableid=None, css=None, display_length=50, table_class='astropy-default', show_row_index='idx')¶
Render the table in HTML and show it in the IPython notebook.
- Parameters:
- tableid
strorNone An html ID tag for the table. Default is
table{id}-XXX, where id is the unique integer id of the table object, id(self), and XXX is a random number to avoid conflicts when printing the same table multiple times.- table_class
strorNone A string with a list of HTML classes used to style the table. The special default string (‘astropy-default’) means that the string will be retrieved from the configuration item
astropy.table.default_notebook_table_class. Note that these table classes may make use of bootstrap, as this is loaded with the notebook. See this page for the list of classes.- css
str A valid CSS string declaring the formatting for the table. Defaults to
astropy.table.jsviewer.DEFAULT_CSS_NB.- display_length
int, optional Number or rows to show. Defaults to 50.
- show_row_index
strorFalse If this does not evaluate to False, a column with the given name will be added to the version of the table that gets displayed. This new column shows the index of the row in the table itself, even when the displayed table is re-sorted by another column. Note that if a column with this name already exists, this option will be ignored. Defaults to “idx”.
- tableid
Notes
Currently, unlike
show_in_browser(withjsviewer=True), this method needs to access online javascript code repositories. This is due to modern browsers’ limitations on accessing local files. Hence, if you call this method while offline (and don’t have a cached version of jquery and jquery.dataTables), you will not get the jsviewer features.
- sort(keys=None, *, kind=None, reverse=False)¶
Sort the table according to one or more keys. This operates on the existing table and does not return a new table.
- Parameters:
Examples
Create a table with 3 columns:
>>> t = Table([['Max', 'Jo', 'John'], ['Miller', 'Miller', 'Jackson'], ... [12, 15, 18]], names=('firstname', 'name', 'tel')) >>> print(t) firstname name tel --------- ------- --- Max Miller 12 Jo Miller 15 John Jackson 18
Sorting according to standard sorting rules, first ‘name’ then ‘firstname’:
>>> t.sort(['name', 'firstname']) >>> print(t) firstname name tel --------- ------- --- John Jackson 18 Jo Miller 15 Max Miller 12
Sorting according to standard sorting rules, first ‘firstname’ then ‘tel’, in reverse order:
>>> t.sort(['firstname', 'tel'], reverse=True) >>> print(t) firstname name tel --------- ------- --- Max Miller 12 John Jackson 18 Jo Miller 15
- to_pandas()[source]¶
Convert this
TimeSeriesto aDataFramewith aDatetimeIndexindex.- Returns:
- dataframe
pandas.DataFrame A pandas
pandas.DataFrameinstance
- dataframe
- update(other, copy=True)¶
Perform a dictionary-style update and merge metadata.
The argument
othermust be aTable, or something that can be used to initialize a table. Columns from (possibly converted)otherare added to this table. In case of matching column names the column from this table is replaced with the one fromother. Ifotheris aTableinstance then|=is available as alternate syntax for in-place update and|can be used merge data to a new table.- Parameters:
- otherastropy:table-like
Data to update this table with.
- copybool
Whether the updated columns should be copies of or references to the originals.
See also
Examples
Update a table with another table:
>>> t1 = Table({'a': ['foo', 'bar'], 'b': [0., 0.]}, meta={'i': 0}) >>> t2 = Table({'b': [1., 2.], 'c': [7., 11.]}, meta={'n': 2}) >>> t1.update(t2) >>> t1 <Table length=2> a b c str3 float64 float64 ---- ------- ------- foo 1.0 7.0 bar 2.0 11.0 >>> t1.meta {'i': 0, 'n': 2}
Update a table with a dictionary:
>>> t = Table({'a': ['foo', 'bar'], 'b': [0., 0.]}) >>> t.update({'b': [1., 2.]}) >>> t <Table length=2> a b str3 float64 ---- ------- foo 1.0 bar 2.0
- values()¶
- values_equal(other)¶
Element-wise comparison of table with another table, list, or scalar.
Returns a
Tablewith the same columns containing boolean values showing result of comparison.- Parameters:
- otherastropy:table-like
objectorlistor scalar Object to compare with table
- otherastropy:table-like
Examples
Compare one Table with other:
>>> t1 = Table([[1, 2], [4, 5], [-7, 8]], names=('a', 'b', 'c')) >>> t2 = Table([[1, 2], [-4, 5], [7, 8]], names=('a', 'b', 'c')) >>> t1.values_equal(t2) <Table length=2> a b c bool bool bool ---- ----- ----- True False False True True True