MyGeneset.info documentation
****************************

Introduction
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  `MyGeneset.info <http://mygeneset.info>`__ provides simple-to-use REST web services to query, retrieve, and store annotation data for collections of genes. It's designed with an emphasis on **simplicity** and **performance**.


Features
^^^^^^^^

* Access curated genesets from public databases, including: `GO <http://geneontology.org/>`__, `KEGG <https://www.genome.jp/kegg/>`__, `MSigDB <https://www.gsea-msigdb.org/gsea/msigdb/>`__, `Disease Ontology <https://disease-ontology.org/>`__/`OMIM <https://www.omim.org/>`__, `Wikipathways <https://www.wikipathways.org/index.php/WikiPathways>`__, and `Reactome <https://reactome.org/>`__.
* Filter genesets to an organism of interest.
* Retrieve gene collections with an identifier of choice.

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Documentation
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   Try it live on our interactive API page <http://mygeneset.info/api>
   doc/data
   doc/release_changes
   doc/query_service
   doc/annotation_service
   doc/response_status_codes


How to cite
------------

See citation page here: http://mygeneset.info/about#cite

FAQ
-------

See FAQ page here: http://mygeneset.info/about#faqs

Related links
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* `mygeneset.info on Github <https://github.com/biothings/mygeneset.info/>`_


Contact us
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* help@mygeneset.info
* `@mygeneinfo <https://twitter.com/mygenesetinfo/>`_


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.. Indices and tables
.. ==================

.. * :ref:`genindex`
.. * :ref:`modindex`
.. * :ref:`search`