ALTREE-ADD-S(1p) | User Contributed Perl Documentation | ALTREE-ADD-S(1p) |
altree-add-S - Title...
altree-add-S [options]
Options: --version program version --short-help|h brief help message --help help message with options descriptions --man full documentation --first-input-file|i input file 1 --second-input-file|j input file 2 data concerning the trait (qualitative or quantitative) --output-file|o output file --epsilon|e epsilon value --data-type|t data type: SNP or DNA --proportion|p proportion of cases in the sample (for qualitative data only) --data-qual|q data type: qualitative or quantitative [--outgroup|g] name of the outgroup --low|l if an haplotype is present equal or less than -l times, the state of S will be set to "?"
This program adds a new character (called "character S") to each haplotype in the input file according to the number of cases and controls carrying it.
2018-11-02 | perl v5.28.0 |