NAME

alignment-info - Show useful statistics about the alignment.

SYNOPSIS

alignment-info alignment-file [tree-file] [OPTIONS]

DESCRIPTION

Show useful statistics about the alignment.

ALLOWED OPTIONS:

--help

produce help message

--align arg

file with sequences and initial alignment

--tree arg

file with initial tree

--alphabet arg

specify the alphabet: DNA, RNA, Amino-Acids, Triplets, or Codons

REPORTING BUGS:

BAli-Phy online help: <http://www.bali-phy.org/docs.php>.

Please send bug reports to <bali-phy-users@googlegroups.com>.

AUTHORS

Benjamin Redelings.