| BP_AACOMP(1p) | User Contributed Perl Documentation | BP_AACOMP(1p) |
bp_aacomp - amino acid composition of protein sequences
bp_aacomp [-f/--format FORMAT] [-h/--help] filename or bp_aacomp [-f/--format FORMAT] < filename or bp_aacomp [-f/--format FORMAT] -i filename
This scripts prints out the count of amino acids over all protein sequences from the input file.
The default sequence format is fasta.
The sequence input can be provided using any of the three methods:
bp_aacomp filename
bp_aacomp -i filename
bp_aacomp < filename
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:
https://github.com/bioperl/bioperl-live/issues
Email jason@bioperl.org
Based on aacomp.c from an old version of EMBOSS
| 2018-10-27 | perl v5.26.2 |