DOKK / manpages / debian 10 / cnvkit / cnvkit-antitarget.1.en
CNVKIT_ANTITARGET(1) User Commands CNVKIT_ANTITARGET(1)

cnvkit_antitarget - Derive off-target ("antitarget") bins from target regions.

usage: cnvkit antitarget [-h] [-g FILENAME] [-a AVG_SIZE] [-m MIN_SIZE]

[-o FILENAME]
targets

BED or interval file listing the targeted regions.

show this help message and exit
Regions of accessible sequence on chromosomes (.bed), as output by genome2access.py.
Average size of antitarget bins (results are approximate). [Default: 150000]
Minimum size of antitarget bins (smaller regions are dropped). [Default: 1/16 avg size, calculated]
Output file name.
March 2019 cnvkit_antitarget 0.9.5