DOKK / manpages / debian 10 / emboss / goname.1e.en
GONAME(1e) EMBOSS Manual for Debian GONAME(1e)

goname - Find GO ontology terms by name

goname -query string [-namespace list] -subclasses boolean -obsolete boolean -goname outobo

goname -help

goname is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Ontology:GO,Data retrieval:Ontology data" command group(s).

-query string

-namespace list

By default all terms are returned. Searches can be limited to one or a few namespaces. Default value: *

-subclasses boolean

Extend the query matches to include all terms which are specialisations (GO sub-classes) of the matched type. Default value: N

-obsolete boolean

The default behaviour is to not use or return obsolete terms. This option if set will include all terms. Default value: N

-goname outobo

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

goname is fully documented via the tfm(1) system.

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

Wrote the script used to autogenerate this manual page.

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.

05/11/2012 EMBOSS 6.4.0