NAME

hilive-build - Index creation tool for HiLive - Realtime Alignment of Illumina Reads

SYNOPSIS

hilive-build [options] INPUT

DESCRIPTION

HiLive index builder v0.1 Index creation tool for HiLive - Realtime Alignment of Illumina Reads Copyright © 2015, Martin S. Lindner HiLive is open-source software. Check with --license for details.

Fixed k-mer size: 15

INPUT

Reference genomes in (multi-) FASTA format

OPTIONS

-o [ --outfile ] arg

Set output file name [Default: INPUT.kix]

-t [ --trim ] arg

Ignore k-mers with more than t occurrences. [Default: no limit]

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.