| Bio::Factory::MapFactoryI(3pm) | User Contributed Perl Documentation | Bio::Factory::MapFactoryI(3pm) |
Bio::Factory::MapFactoryI - A Factory for getting markers
# get a Map Factory somehow likely from Bio::MapIO system
while( my $map = $mapin->next_map ) {
print "map name is ", $map->name, " length is ",
$map->length, " ", $map->units, "\n";
$mapout->write_map($map);
}
This interface describes the necessary minimum methods for getting Maps from a data stream. It also supports writing Map data back to a stream.
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:
https://github.com/bioperl/bioperl-live/issues
Email jason@bioperl.org
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : next_map Usage : my $map = $factory->next_map; Function: Get a map from the factory Returns : L<Bio::Map::MapI> Args : none
Title : write_map Usage : $factory->write_map($map); Function: Write a map out through the factory Returns : none Args : L<Bio::Map::MapI>
| 2018-10-27 | perl v5.26.2 |