| Bio::Map::EntityI(3pm) | User Contributed Perl Documentation | Bio::Map::EntityI(3pm) |
Bio::Map::EntityI - An Entity Interface
# do not use this module directly
This interface describes the basic methods required for entities. An Entity is a kind of Bio::Map object that holds instance-specific data but relies on registering itself with a PositionHandler to handle its relationships with other entities. These relationships between objects are based around shared Positions, so Bio::Map::PositionI objects are a special kind of EntityI, along with Bio::Map::MappableI and Bio::Map::MapI objects.
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Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.
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The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : get_position_handler Usage : my $position_handler = $entity->get_position_handler(); Function: Gets a PositionHandlerI that $entity is registered with. Returns : Bio::Map::PositionHandlerI object Args : none
Any methods related to interation with other entities should be implemented as a call to the PositionHandler
| 2018-10-27 | perl v5.26.2 |