| Bio::Restriction::IO::bairoch(3pm) | User Contributed Perl Documentation | Bio::Restriction::IO::bairoch(3pm) |
Bio::Restriction::IO::bairoch - bairoch enzyme set
Do not use this module directly. Use it via the Bio::Restriction::IO class.
This is the most complete format of the REBASE files, and basically includes all the data on each of the restriction enzymes.
This parser is for the Bairoch format (aka MacVector, Vector NTI, PC/Gene (Bairoch) format), REBASE format #19
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing lists Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.
Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web:
https://github.com/bioperl/bioperl-live/issues
Rob Edwards, redwards@utmem.edu
Heikki Lehvaslaiho, heikki-at-bioperl-dot-org
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : read Usage : $renzs = $stream->read Function: reads all the restrction enzymes from the stream Returns : a Bio::Restriction::Restriction object Args : none
Title : write
Usage : $stream->write($renzs)
Function: writes restriction enzymes into the stream
Returns : 1 for success and 0 for error
Args : a Bio::Restriction::Enzyme
or a Bio::Restriction::EnzymeCollection object
| 2018-10-27 | perl v5.26.2 |