| Bio::Restriction::IO::itype2(3pm) | User Contributed Perl Documentation | Bio::Restriction::IO::itype2(3pm) |
Bio::Restriction::IO::itype2 - itype2 enzyme set
Do not use this module directly. Use it via the Bio::Restriction::IO class.
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Please direct usage questions or support issues to the mailing list:
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rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.
Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web:
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Rob Edwards, redwards@utmem.edu
Heikki Lehvaslaiho, heikki-at-bioperl-dot-org Mark A. Jensen, maj-at-fortinbras-dot-us
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : read Usage : $renzs = $stream->read Function: reads all the restrction enzymes from the stream Returns : a Bio::Restriction::IO object Args : none
Internally creates a hash of enzyme information which is passed on to Bio::Restriction::Enzyme::new.
Title : _xln_sub
Function: Translates withrefm coords to Bio::Restriction coords
Args : Bio::Restriction::Enzyme object, scalar integer (cut posn)
Note : Used internally; pass as a coderef to the B:R::Enzyme
constructor
Title : write
Usage : $stream->write($renzs)
Function: writes restriction enzymes into the stream
Returns : 1 for success and 0 for error
Args : a Bio::Restriction::Enzyme
or a Bio::Restriction::EnzymeCollection object
| 2018-10-27 | perl v5.26.2 |