| Bio::SeqIO::MultiFile(3pm) | User Contributed Perl Documentation | Bio::SeqIO::MultiFile(3pm) |
Bio::SeqIO::MultiFile - Treating a set of files as a single input stream
my $seqin = Bio::SeqIO::MultiFile->new( -format => 'Fasta',
-files => ['file1','file2'] );
while (my $seq = $seqin->next_seq) {
# do something with $seq
}
Bio::SeqIO::MultiFile provides a simple way of bundling a whole set of identically formatted sequence input files as a single stream. File format is automatically determined by "Bio::SeqIO".
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.
Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web:
https://github.com/bioperl/bioperl-live/issues
Email birney@ebi.ac.uk
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : next_seq Usage : Function: Example : Returns : Args :
Title : next_primary_seq Usage : Function: Example : Returns : Args :
Title : _load_file Usage : Function: Example : Returns : Args :
Title : _set_file Usage : Function: Example : Returns : Args :
Title : _current_seqio Usage : $obj->_current_seqio($newval) Function: Example : Returns : value of _current_seqio Args : newvalue (optional)
| 2018-10-27 | perl v5.26.2 |