DOKK / manpages / debian 10 / libbio-perl-perl / Bio::Tools::Profile.3pm.en
Bio::Tools::Profile(3pm) User Contributed Perl Documentation Bio::Tools::Profile(3pm)

Bio::Tools::Profile - parse Profile output

 use Bio::Tools::Profile;
 my $profile_parser = Bio::Tools::Profile->new(-fh =>$filehandle );
 while( my $profile_feat = $profile_parser->next_result ) {
       push @profile_feat, $profile_feat;
}

 Parser for Profile output

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 The rest of the documentation details each of the object methods.
 Internal methods are usually preceded with a _

 Title   : new
 Usage   : my $obj = Bio::Tools::Profile->new();
 Function: Builds a new Bio::Tools::Profile object
 Returns : Bio::Tools::Profile
 Args    : -filename
           -fh ($filehandle)

 Title   : next_result
 Usage   : my $feat = $profile_parser->next_result
 Function: Get the next result set from parser data
 Returns : L<Bio::SeqFeature::FeaturePair>
 Args    : none

 Title   : create_feature
 Usage   : my $feat= $profile_parser->create_feature($feature)
 Function: creates a Bio::SeqFeature::FeaturePair object
 Returns : L<Bio::SeqFeature::FeaturePair>
 Args    :
2018-10-27 perl v5.26.2