| Bio::TreeIO::tabtree(3pm) | User Contributed Perl Documentation | Bio::TreeIO::tabtree(3pm) |
Bio::TreeIO::tabtree - A simple output format which displays a tree as an ASCII drawing
use Bio::TreeIO;
my $in = Bio::TreeIO->new(-file => 'input', -format => 'newick');
my $out = Bio::TreeIO->new(-file => '>output', -format => 'tabtree');
while( my $tree = $in->next_tree ) {
$out->write_tree($tree);
}
This is a made up format just for outputting trees as an ASCII drawing.
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The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : new Usage : my $obj = Bio::TreeIO::tabtree->new(); Function: Builds a new Bio::TreeIO::tabtree object Returns : Bio::TreeIO::tabtree Args :
Title : write_tree Usage : $treeio->write_tree($tree); Function: Write a tree out to data stream in newick/phylip format Returns : none Args : Bio::Tree::TreeI object
Title : next_tree Usage : Function: Sorry not possible with this format Returns : none Args : none
| 2018-10-27 | perl v5.26.2 |