DOKK / manpages / debian 10 / mipe / genotype2mipe.1.en
GENOTYPE2MIPE(1) User Contributed Perl Documentation GENOTYPE2MIPE(1)

genotype2mipe.pl - Inserts SNP data into MIPE file
based on MIPE version v0.9
Make sure SNPs are already defined in the USE part of the PCR record.
arguments: * mipe_file
* STDIN: tab-delimited list of data, in the following order: PCR ID, sample ID, SNP ID, ambiguity code

snp2mipe.pl my_file.mipe < my_data.txt

See http://mipe.sourceforge.net

Jan Aerts (jan.aerts@bbsrc.ac.uk)

2018-10-22 perl v5.26.2