COILS-WRAP(1) | User Commands | COILS-WRAP(1) |
coils-wrap - runs ncoils three times to give you a three-window output
coils-wrap [OPTION]
coils-wrap runs ncoils three times to give you a three-window output.
ncoils is a program that compares a sequence to a database of known parallel two-stranded coiled-coils and derives a similarity score. By comparing this score to the distribution of scores in globular and coiled-coil proteins, the program then calculates the probability that the sequence will adopt a coiled-coil conformation.
"coils-wrap -m MTIDK -i /usr/share/doc/ncoils/1srya.fa -o /tmp/coils.out -r /tmp/coils_raw.txt && less /tmp/coils.out /tmp/coils_raw.txt"
"ncoils -win 14 < /usr/share/doc/ncoils/1srya.fa"
R.B. Russell, A.N. Lupas, 1999
GPL
Based on Lupas, Van Dyck & Stock (1991) Science 252,1162-1164
ncoils(1), "usr/share/doc/coils/README", <http://www.russelllab.org/cgi-bin/coils/coils-svr.pl>
2018-10-28 | 2002 |