DOKK
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manpages
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debian 10
/ roary
Pages:
Bio::Roary.3pm.en
Bio::Roary::AccessoryBinaryFasta.3pm.en
Bio::Roary::AccessoryClustering.3pm.en
Bio::Roary::AnalyseGroups.3pm.en
Bio::Roary::AnnotateGroups.3pm.en
Bio::Roary::AssemblyStatistics.3pm.en
Bio::Roary::BedFromGFFRole.3pm.en
Bio::Roary::ChunkFastaFile.3pm.en
Bio::Roary::ClustersRole.3pm.en
Bio::Roary::CombinedProteome.3pm.en
Bio::Roary::CommandLine::AssemblyStatistics.3pm.en
Bio::Roary::CommandLine::Common.3pm.en
Bio::Roary::CommandLine::CreatePanGenome.3pm.en
Bio::Roary::CommandLine::ExtractProteomeFromGff.3pm.en
Bio::Roary::CommandLine::GeneAlignmentFromNucleotides.3pm.en
Bio::Roary::CommandLine::IterativeCdhit.3pm.en
Bio::Roary::CommandLine::ParallelAllAgainstAllBlastp.3pm.en
Bio::Roary::CommandLine::QueryRoary.3pm.en
Bio::Roary::CommandLine::Roary.3pm.en
Bio::Roary::CommandLine::RoaryCoreAlignment.3pm.en
Bio::Roary::CommandLine::RoaryPostAnalysis.3pm.en
Bio::Roary::CommandLine::RoaryReorderSpreadsheet.3pm.en
Bio::Roary::CommandLine::TransferAnnotationToGroups.3pm.en
Bio::Roary::CommandLine::UniqueGenesPerSample.3pm.en
Bio::Roary::ContigsToGeneIDsFromGFF.3pm.en
Bio::Roary::Exceptions.3pm.en
Bio::Roary::External::Blastp.3pm.en
Bio::Roary::External::Cdhit.3pm.en
Bio::Roary::External::CheckTools.3pm.en
Bio::Roary::External::Fasttree.3pm.en
Bio::Roary::External::GeneAlignmentFromNucleotides.3pm.en
Bio::Roary::External::IterativeCdhit.3pm.en
Bio::Roary::External::Mafft.3pm.en
Bio::Roary::External::Makeblastdb.3pm.en
Bio::Roary::External::Mcl.3pm.en
Bio::Roary::External::PostAnalysis.3pm.en
Bio::Roary::External::Prank.3pm.en
Bio::Roary::ExtractCoreGenesFromSpreadsheet.3pm.en
Bio::Roary::ExtractProteomeFromGFF.3pm.en
Bio::Roary::ExtractProteomeFromGFFs.3pm.en
Bio::Roary::FilterFullClusters.3pm.en
Bio::Roary::FilterUnknownsFromFasta.3pm.en
Bio::Roary::GeneNamesFromGFF.3pm.en
Bio::Roary::GroupLabels.3pm.en
Bio::Roary::GroupStatistics.3pm.en
Bio::Roary::InflateClusters.3pm.en
Bio::Roary::IterativeCdhit.3pm.en
Bio::Roary::JobRunner::Local.3pm.en
Bio::Roary::JobRunner::Parallel.3pm.en
Bio::Roary::JobRunner::Role.3pm.en
Bio::Roary::LookupGeneFiles.3pm.en
Bio::Roary::MergeMultifastaAlignments.3pm.en
Bio::Roary::OrderGenes.3pm.en
Bio::Roary::Output::BlastIdentityFrequency.3pm.en
Bio::Roary::Output::CoreGeneAlignmentCoordinatesEMBL.3pm.en
Bio::Roary::Output::DifferenceBetweenSets.3pm.en
Bio::Roary::Output::EMBLHeaderCommon.3pm.en
Bio::Roary::Output::EmblGroups.3pm.en
Bio::Roary::Output::GroupMultifasta.3pm.en
Bio::Roary::Output::GroupsMultifastaNucleotide.3pm.en
Bio::Roary::Output::GroupsMultifastaProtein.3pm.en
Bio::Roary::Output::GroupsMultifastas.3pm.en
Bio::Roary::Output::GroupsMultifastasNucleotide.3pm.en
Bio::Roary::Output::NumberOfGroups.3pm.en
Bio::Roary::Output::QueryGroups.3pm.en
Bio::Roary::ParallelAllAgainstAllBlast.3pm.en
Bio::Roary::ParseGFFAnnotationRole.3pm.en
Bio::Roary::PostAnalysis.3pm.en
Bio::Roary::PrepareInputFiles.3pm.en
Bio::Roary::PresenceAbsenceMatrix.3pm.en
Bio::Roary::QC::Report.3pm.en
Bio::Roary::ReformatInputGFFs.3pm.en
Bio::Roary::ReorderSpreadsheet.3pm.en
Bio::Roary::SampleOrder.3pm.en
Bio::Roary::SequenceLengths.3pm.en
Bio::Roary::SortFasta.3pm.en
Bio::Roary::SplitGroups.3pm.en
Bio::Roary::SpreadsheetRole.3pm.en
Bio::Roary::UniqueGenesPerSample.3pm.en
create_pan_genome.1p.en
create_pan_genome_plots.1p.en
extract_proteome_from_gff.1p.en
iterative_cdhit.1p.en
pan_genome_assembly_statistics.1p.en
pan_genome_core_alignment.1p.en
pan_genome_post_analysis.1p.en
pan_genome_reorder_spreadsheet.1p.en
parallel_all_against_all_blastp.1p.en
protein_alignment_from_nucleotides.1p.en
query_pan_genome.1p.en
roary-pan_genome_reorder_spreadsheet.1p.en
roary-query_pan_genome.1p.en
roary-unique_genes_per_sample.1p.en
roary.1p.en
transfer_annotation_to_groups.1p.en