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abyss-tofastq(1) User Commands abyss-tofastq(1)

abyss-tofastq - convert various file formats to FASTQ format
abyss-tofasta - convert various file formats to FASTA format

abyss-tofastq [FILE]...
abyss-tofasta [FILE]...

Convert the input files to FASTA or FASTQ format. FILE may be in FASTA, FASTQ, qseq, export, SRA, SAM or BAM format and may be compressed with gz, bz2 or xz and may be tarred.

Written by Shaun Jackman.

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Copyright 2015 Canada's Michael Smith Genome Sciences Centre

2015-May ABySS 2.2.5