DOKK / manpages / debian 11 / bio-tradis / tradis_gene_insert_sites.1p.en
TRADIS_GENE_INSERT_SITES(1p) User Contributed Perl Documentation TRADIS_GENE_INSERT_SITES(1p)

tradis_gene_insert_sites - Generate insertion site details from TraDIS pipeline plots

version 1.4.5

This script is for TRADIS analysis. It takes in a plot file created by the TRADIS pathogen informatics pipeline, and an embl file of annotation. It then outputs a tab delimited file with the insert site details. This is then used as input to an R script to calculate essentialit y.

tradis_gene_insert_sites.pl

path-help@sanger.ac.uk Original author: Lars Barquist

Carla Cummins <path-help@sanger.ac.uk>

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

  The GNU General Public License, Version 3, June 2007
2020-01-11 perl v5.30.0