| sand_uncompress_reads(1) | Cooperative Computing Tools | sand_uncompress_reads(1) |
sand_uncompress_reads - uncompress sequence data
sand_uncompress_reads [-qvh] [infile] [outfile]
sand_uncompress_reads reads sequence data in compressed FASTA format (cfa) used by sand_filter_master(1) and sand_align_master(1). and produces output in the standard FASTA format.
If the output file is omitted, standard output is used. if the input file is omitted, standard input is used. After completing the compression, this program will output a summary line of sequences and bytes compressed.
On success, returns zero. On failure, returns non-zero.
To uncompress mydata.cfa into mydata.fasta:
% sand_uncompress_reads mydata.cfa mydata.fa
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| CCTools 7.1.2 FINAL |