DOKK / manpages / debian 11 / emboss / showorf.1e.en
SHOWORF(1e) EMBOSS Manual for Debian SHOWORF(1e)

showorf - Display a nucleotide sequence and translation in pretty format

showorf -sequence sequence -frames list [-table list] -outfile outfile [-ruler boolean] [-plabel boolean] [-nlabel boolean] -width integer

showorf -help

showorf is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:Gene finding,Nucleic:Translation" command group(s).

-sequence sequence

-frames list

Default value: 1,2,3,4,5,6

-table list

-outfile outfile

-ruler boolean

Default value: Y

-plabel boolean

Default value: Y

-nlabel boolean

Default value: Y

-width integer

Default value: 50

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

showorf is fully documented via the tfm(1) system.

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

Wrote the script used to autogenerate this manual page.

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.

05/11/2012 EMBOSS 6.4.0