DOKK / manpages / debian 11 / emboss / syco.1e.en
SYCO(1e) EMBOSS Manual for Debian SYCO(1e)

syco - Draw synonymous codon usage statistic plot for a nucleotide sequence

syco -sequence sequence -cfile codon -window integer -uncommon boolean -minimum float -plot toggle -graph xygraph -outfile outfile

syco -help

syco is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:Codon usage,Nucleic:Gene finding" command group(s).

-sequence sequence

-cfile codon

Codon usage file

-window integer

Default value: 30

-uncommon boolean

Default value: N

-minimum float

Default value: .15

-plot toggle

Default value: Y

-graph xygraph

-outfile outfile

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

syco is fully documented via the tfm(1) system.

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

Wrote the script used to autogenerate this manual page.

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.

05/11/2012 EMBOSS 6.4.0