DOKK / manpages / debian 11 / fastaq / fastaq-caf_to_fastq.1.en
FASTAQ-CAF_TO_FASTQ(1) User Commands FASTAQ-CAF_TO_FASTQ(1)

fastaq_caf_to_fastq - Converts a CAF file to FASTQ format

usage: fastaq_caf_to_fastq [options] <infile> <outfile>

Converts CAF file to FASTQ format

Name of input CAF file.
Name of output FASTQ file

show this help message and exit
Use clipping info to clip reads, if present in the input CAF file (as lines of the form "Clipping QUAL start end"). Default is to not clip
Minimum length of sequence to output [1]
April 2020 fastaq 3.17.0