DOKK / manpages / debian 11 / idba-extra / fq2fa.1.en
FQ2FA(1) User Commands FQ2FA(1)

fq2fa - Convert Fastq sequences to Fasta sequences.

fq2fa tmp.fq tmp.fa [...]

fq2fa - Convert Fastq sequences to Fasta sequences.

fq2fa --paired tmp.fq tmp.fa fq2fa --merge tmp_1.fq tmp_2.fq tmp.fa

if the reads are paired-end in one file
if the reads are paired-end in two files
filter out reads containing 'N'


This manpage was written by Andreas Tille for the Debian distribution and
can be used for any other usage of the program.

March 2020 fq2fa 1.1.3