| Bio::Tools::EUtilities::Query::GlobalQuery(3pm) | User Contributed Perl Documentation | Bio::Tools::EUtilities::Query::GlobalQuery(3pm) |
Bio::Tools::EUtilities::Query::GlobalQuery - Container class for egquery data.
version 1.77
#### should not create instance directly; Bio::Tools::EUtilities does this ####
my $parser = Bio::Tools::EUtilities->new(-eutil => 'egquery',
-term => 'BRCA1');
# $gquery is a Bio::Tools::EUtilities::Query::GlobalQuery
while (my $gquery = $parser->next_GlobalQuery) {
print $gquery->to_string."\n"; # stringify
print "DB:".$gquery->get_db."\t".$gquery->get_count;
}
This is a simple container class for egquery data. Currently this just contains various accessors for the data, such as get_database(), get_count(), etc. for each item in a global query.
Title : get_term Usage : $st = $qd->get_term; Function: retrieve the term for the global search Returns : string Args : none
Title : get_database Usage : $ct = $qd->get_database; Function: retrieve the database Returns : string Args : none
Title : get_count Usage : $ct = $qd->get_count; Function: retrieve the count for the database Returns : string Args : none
Title : get_status Usage : $st = $qd->get_status; Function: retrieve the query status for database in db() Returns : string Args : none
Title : get_menu_name Usage : $ct = $qd->get_menu_name; Function: retrieve the full name for the database in db() Returns : string Args : None
Title : to_string Usage : $foo->to_string() Function : converts current object to string Returns : none Args : (optional) simple data for text formatting Note : Used generally for debugging and for the print_GlobalQuery method
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion https://bioperl.org/Support.html - About the mailing lists
Please direct usage questions or support issues to the mailing list: bioperl-l@bioperl.org rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:
https://github.com/bioperl/bio-eutilities/issues
Chris Fields <cjfields@bioperl.org>
This software is copyright (c) 2006-2013 by Chris Fields.
This software is available under the same terms as the perl 5 programming language system itself.
| 2020-03-13 | perl v5.30.0 |