| Bio::Search::Result::hmmer3Result(3pm) | User Contributed Perl Documentation | Bio::Search::Result::hmmer3Result(3pm) |
Bio::Search::Result::hmmer3Result - DESCRIPTION of Object
Give standard usage here
Describe the object here
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The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : new
Usage : my $obj = new Bio::Search::Result::hmmer3Result.pm();
Function: Builds a new Bio::Search::Result::hmmer3Result.pm object
Returns : an instance of Bio::Search::Result::hmmer3Result.pm
Args : -hmm_name => string, name of hmm file
-sequence_file => name of the sequence file
Title : hmm_name Usage : $obj->hmm_name($newval) Function: Get/Set the value of hmm_name Returns : value of hmm_name Args : newvalue (optional)
Title : sequence_file Usage : $obj->sequence_file($newval) Function: Get/Set the value of sequence_file Returns : value of sequence_file Args : newvalue (optional)
Title : next_model
Usage : my $domain = $result->next_model
Function: Returns the next domain - this
is an alias for next_hit
Returns : L<Bio::Search::Hit::HitI> object
Args : none
Title : models
Usage : my @domains = $result->models;
Function: Returns the list of HMM models seen - this
is an alias for hits()
Returns : Array of L<Bio::Search::Hit::HitI> objects
Args : none
Title : rewind
Usage : $result->rewind;
Function: Allow one to reset the Hit iteration to the beginning
Since this is an in-memory implementation
Returns : none
Args : none
| 2019-10-29 | perl v5.30.0 |