DOKK / manpages / debian 11 / pinfish / polish_clusters.1.en
POLISH_CLUSTERS(1) User Commands POLISH_CLUSTERS(1)

polish_clusters - Collection of tools to annotate genomes using long read transcriptomics data

Print out version.

-a string

Read cluster memberships in tabular format.

-c int

Minimum cluster size. (default 1)

-d string

Location of temporary directory.
Print out help message.
Do not load all reads in memory (slower).

-o string

Output fasta file.

-t int

Number of cores to use. (default 4)

-x string

Arguments passed to minimap2.

-y string

Arguments passed to racon.


This manpage was written by Nilesh Patra for the Debian distribution and
can be used for any other usage of the program.

September 2020 polish_clusters 0.1.0+ds