DOKK / manpages / debian 11 / roguenarok / rnr-tii.1.en
RNR-TII(1) User Commands RNR-TII(1)

rnr-tii - computes the taxonomic instability index

rnr-tii -i <bootTrees> -n <runId> [-w <workingDir>] [-h] [-x <excludeFile>]

A collection of bootstrap trees.
An identifier for this run.

The exponent used in the TII formula. Use small values to emphasize close relationships and vice versa. DEFAULT: 2
A working directory where output files are created.
Exclude the taxa in this file (one taxon per line) prior to computing the TII.
This help file.

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.

March 2017 rnr-tii 1.0