NAME

vcfanno - annotate a VCF with other VCFs/BEDs/tabixed files

DESCRIPTION

============================================= vcfanno version 0.3.2 [built with go1.14.4]

see: https://github.com/brentp/vcfanno ============================================= Usage of vcfanno:

-base-path string

optional base-path to prepend to annotation files in the config

-ends

annotate the start and end as well as the interval itself.

-lua string

optional path to a file containing custom javascript functions to be used as ops

-p int

number of processes to use. (default 2)

-permissive-overlap

annotate with an overlapping variant even it doesn't share the same ref and alt alleles. Default is to require exact match between variants.

AUTHOR

This manpage was written by Nilesh Patra for the Debian distribution and
can be used for any other usage of the program.