DOKK / manpages / debian 12 / aegean / pmrna.1.en
PMRNA(1) User Commands PMRNA(1)

pmrna - filter out all but the primary isoform from each gene of the input

pmrna [options] < annot.gff3 > new.gff3

Options:

print this help message and exit
flag indicating that introns are declared explicitly and do not need to be inferred from exon features; default is to infer introns
report a single representative mRNA for each locus instead of each gene
write each gene/mRNA mapping to the specified file
disable pseudogene detection and correction
January 2016 pmrna 0.15.1