Bio::Tradis::FilterTags(3pm) | User Contributed Perl Documentation | Bio::Tradis::FilterTags(3pm) |
Bio::Tradis::FilterTags - Filter tags in a fastq file
version 1.4.5
Reads in a fastq file with tradis tags already attached to the start of the sequence Filters reads that contain the provided tag Outputs a file *.tag.fastq unless an alternative outfile name is specified
use Bio::Tradis::FilterTags; my $pipeline = Bio::Tradis::FilterTags->new(fastqfile => 'abc', tag => 'abc'); $pipeline->filter_tags();
"filter_tags" - outputs all reads containing the provided tag to "outfile"
Carla Cummins <path-help@sanger.ac.uk>
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
2020-01-11 | perl v5.30.0 |