| BP_SEQRETSPLIT(1p) | User Contributed Perl Documentation | BP_SEQRETSPLIT(1p) |
bp_seqretsplit - split a sequence (or stream) into a single file per sequence
bp_seqretsplit file1 file2 .. # or bp_seqretsplit < file1
The script will split all sequences from fasta file(s) (or stdin) to individual files. The filename is the sequence ID (everything before the 1st whitespace in a FASTA header). Currently it doesn't check to see that it isn't overwriting an existing file so IDs should be unique
This is inspired by EMBOSS seqretsplit tool.
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via email or the web:
https://github.com/bioperl/bioperl-live/issues
Jason Stajich <jason_AT_bioperl_DOT_org>
| 2021-08-15 | perl v5.32.1 |