statistics - Image statistics
statistics [options] ImageFile0 [ImageFile1 ...]
Statistical computations on image pixel intensities, i.e., means
and standard deviations
- --help
- Write list of basic command line options to standard output.
- --help-all
- Write complete list of basic and advanced command line options to standard
output.
- --wiki
- Write list of command line options to standard output in MediaWiki
markup.
- --man
- Write man page source in 'nroff' markup to standard output.
- --version
- Write toolkit version to standard output.
- --echo
- Write the current command line to standard output.
- --verbose-level
<integer>
- Set verbosity level.
- --verbose,
-v
- Increment verbosity level by 1 (deprecated; supported for backward
compatibility).
- --threads
<integer>
- Set maximum number of parallel threads (for POSIX threads and
OpenMP).
- --label,
-l
- Interpret voxel values as labels
- --gray,
-g
- Interpret voxel values as gray values (default) [This is the
default]
- --log, -L
- Apply log() function to data
- --exp, -e
- Apply exp() function to data
- --num-bins
<integer>, -n <integer>
- Number of histogram bins. [Default: 256]
- --column,
-C
- Write statistics in column format rather than line format.
- --e-notation,
-E
- Write floating point numbers in #e# notation (i.e., 1e-3 instead of
0.001)
- --mask
<string>, -m <string>
- Analyze region based on binary mask file [Default: disabled]
- --Mask
<string>, -M <string>
- Analyze regions separately based on mask file (label field). [Default:
NONE]
- --mask-output-all-up-to
<integer>
- Output results for all mask values up to given value, even such that do
not actually appear in the mask. [Default: 0]
- --percentile
<double>, -p <double>
- Add value to list of percentile to compute.
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg
Jefferis, Calvin R. Maurer, Daniel B. Russakoff, and Yaroslav Halchenko
http://www.fsf.org/licensing/licenses/gpl.html
Report bugs at http://nitrc.org/projects/cmtk/
CMTK is developed with support from the NIAAA under Grant
AA021697, National Consortium on Alcohol and Neurodevelopment in Adolescence
(N-CANDA): Data Integration Component. From April 2009 through September
2011, CMTK development and maintenance was supported by the NIBIB under
Grant EB008381.