DOKK / manpages / debian 12 / genometools / gt-seqorder.1.en
GT-SEQORDER(1) GenomeTools Manual GT-SEQORDER(1)

gt-seqorder - Output sequences as MultiFasta in specified order.

gt seqorder (-invert|-sort|-revsort|-shuffle|-sorthdr|-sorthdrnum) encseq

-invert [yes|no]

invert order of sequences (default: no)

-sort [yes|no]

sort sequences lexicographically (by actual sequence) (default: no)

-revsort [yes|no]

sort sequences in reverse lexicographic order (default: no)

-sorthdr [yes|no]

sort sequences lexicographically by sequence header (default: no)

-sorthdrnum [yes|no]

sort sequences numerically by sequence header (default: no)

-shuffle [yes|no]

shuffle sequences pseudo-randomly (default: no)

-sortlength [yes|no]

sort by decreasing length (default: no)

-help

display help and exit

-version

display version information and exit

Report bugs to https://github.com/genometools/genometools/issues.

11/28/2022 GenomeTools 1.6.2