DOKK / manpages / debian 12 / kmc / kmc_tools-dump.1.en
KMC_TOOLS-DUMP(1)   KMC_TOOLS-DUMP(1)

kmc_tools-dump - dump k-mers and counters to text file

kmc_tools dump [dump_params] <inputdb> [input_params] <output>

This command produces a text dump of the KMC database.

For each input there are additional parameters:

-ci<value>

exclude k-mers occurring less than <value> times

-cx<value>

exclude k-mers occurring more of than <value> times

Dump operation parameters:

-s

sorted output

kmc_tools dump wy_kmc2 -ci3 -cx1000 dump.txt

KMC was originally written by:

•Sebastian Deorowicz ( <sebastian.deorowicz@polsl.pl>)

•Marek Kokot

•Szymon Grabowski

•Agnieszka Debudaj-Grabysz

KMC is a free software distributed under GNU GPL3 licence for academic, research, and commercial use.