| GO::Model::Seq(3pm) | User Contributed Perl Documentation | GO::Model::Seq(3pm) |
GO::Model::Seq - biological sequence
print $gene_product->seq->seq;
represents a biological sequence; uses the bioperl Bio::PrimarySeq class
any call that you can do on a bioperl sequence object, you can do here, with the addition of the calls below
to get bioperl, see http://www.bioperl.org
Usage - Returns - Bio::PrimarySeq Args -
Usage - my $md5 = $seq->md5checksum() OR $seq->md5checksum($md5) Returns - 32 char hex string Args - 32 char hex string [optional]
checksum for seq - easy way to check if it has been changed etc
(requires Digest::MD5 module from CPAN)
Usage - Returns - Args -
- Usage : $term->add_xref($xref); - Args : GO::Term::Xref
| 2021-01-09 | perl v5.32.0 |