| VCFCHECK(1) | vcfcheck (VCF metrics) | VCFCHECK(1) |
vcfcheck
vcfcheck options
Validate integrity and identity of the VCF by verifying that the VCF record’s REF matches a given reference file.
options:
-f, --fasta-reference FASTA reference file to use to obtain primer sequences
-x, --exclude-failures If a record fails, don't print it. Otherwise do.
-k, --keep-failures Print if the record fails, otherwise not.
-h, --help Print this message.
-v, --version Print version. Type: metrics
Copyright 2011-2022 (C) Erik Garrison and vcflib contributors. MIT licensed.
Erik Garrison and vcflib contributors.
| vcfcheck (vcflib) |