DOKK / manpages / debian 12 / libvcflib-tools / vcfgenosummarize.1.en
VCFGENOSUMMARIZE(1) vcfgenosummarize (VCF statistics) VCFGENOSUMMARIZE(1)

vcfgenosummarize

vcfgenosummarize <[input file] >[output vcf]

Adds summary statistics to each record summarizing qualities reported in called genotypes. Uses: RO (reference observation count), QR (quality sum reference observations) AO (alternate observation count), QA (quality sum alternate observations)

Type: statistics
    

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vcflib(1)

Copyright 2011-2022 (C) Erik Garrison and vcflib contributors. MIT licensed.

Erik Garrison and vcflib contributors.

vcfgenosummarize (vcflib)