DOKK / manpages / debian 12 / libvcflib-tools / vcfgenotypecompare.1.en
VCFGENOTYPECOMPARE(1) vcfgenotypecompare (VCF statistics) VCFGENOTYPECOMPARE(1)

vcfgenotypecompare

vcfgenotypecompare

adds statistics to the INFO field of the vcf file describing the amount of discrepancy between the genotypes (GT) in the vcf file and the genotypes reported in the . use this after vcfannotategenotypes to get correspondence statistics for two vcfs.

Type: statistics
    

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vcflib(1)

Copyright 2011-2022 (C) Erik Garrison and vcflib contributors. MIT licensed.

Erik Garrison and vcflib contributors.

vcfgenotypecompare (vcflib)