DOKK / manpages / debian 12 / libvcflib-tools / vcfhetcount.1.en
VCFHETCOUNT(1) vcfhetcount (VCF metrics) VCFHETCOUNT(1)

vcfhetcount

vcfhetcount

Calculate the heterozygosity rate: count the number of alternate alleles in heterozygous genotypes in all records in the vcf file

outputs a count for each individual in the file
Type: metrics
    

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vcflib(1)

Copyright 2011-2022 (C) Erik Garrison and vcflib contributors. MIT licensed.

Erik Garrison and vcflib contributors.

vcfhetcount (vcflib)