| VCFROC(1) | vcfroc (VCF statistics) | VCFROC(1) |
vcfroc
vcfroc options []
Generates a pseudo-ROC curve using sensitivity and specificity estimated against a putative truth set. Thresholding is provided by successive QUAL cutoffs.
options:
-t, --truth-vcf FILE use this VCF as ground truth for ROC generation
-w, --window-size N compare records up to this many bp away (default 30)
-c, --complex directly compare complex alleles, don't parse into primitives
-r, --reference FILE FASTA reference file
Copyright 2011-2022 (C) Erik Garrison and vcflib contributors. MIT licensed.
Erik Garrison and vcflib contributors.
| vcfroc (vcflib) |