NAME

vcfsample2info

SYNOPSIS

vcfsample2info options

DESCRIPTION

Take annotations given in the per-sample fields and add the mean, median, min, or max to the site-level INFO.

OPTIONS

options:


    -f, --field         Add information about this field in samples to INFO column


    -i, --info          Store the computed statistic in this info field


    -a, --average       Take the mean of samples for field (default)


    -m, --median        Use the median


    -n, --min           Use the min


    -x, --max           Use the max
    

EXIT VALUES

0

Success

not 0

Failure

SEE ALSO

vcflib(1)

OTHER

LICENSE

Copyright 2011-2022 (C) Erik Garrison and vcflib contributors. MIT licensed.

AUTHORS

Erik Garrison and vcflib contributors.