DOKK / manpages / debian 12 / mecat2 / mecat2pcan.1.en
MECAT2PCAN(1) User Commands MECAT2PCAN(1)

mecat2pcan - Partition consensus hits into smaller parts

mecat2pcan [options] seqdb_dir pcan_dir cns_hits

Command line tool to partition consensus hits into small parts

-p <Integer, >0>

Number of reads in each part Default = '100000'

-k <Integer, >0>

Number of parts processed at each round (If <0, then it will be set to system limit value) Default = '100'

-t <Integer, >0>

Number of CPU threads Default = '1'

July 2020 mecat2pcan