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mia-2dmyoseries-compdice(1) General Commands Manual mia-2dmyoseries-compdice(1)

mia-2dmyoseries-compdice - Evaluate the dice index between segmentations.

mia-2dmyoseries-compdice -1 <first> -2 <second> [options]

mia-2dmyoseries-compdice This program is used to evaluate the per-frame dice index of segmented regions of two image series

-1 --first=(required, input); string
first segmentation set

-2 --second=(required, input); string
second segmentation set

images to skip atthe begin of the series

verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:

trace ‐ Function call trace
debug ‐ Debug output
info ‐ Low level messages
message ‐ Normal messages
warning ‐ Warnings
fail ‐ Report test failures
error ‐ Report errors
fatal ‐ Report only fatal errors
print copyright information

print this help

-? --usage
print a short help

print the version number and exit

Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).

Evaluate the per-frame dice index of the segmentations of set segment.set with respect to the segmentation set reference.set skipping two images at the beginning.

mia-2dmyoseries-compdice -i segment.set -r reference.set -k 2

Gert Wollny

This software is Copyright (c) 1999‐2015 Leipzig, Germany and Madrid, Spain. It comes with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the option '--copyright'.

v2.4.7 USER COMMANDS