DOKK / manpages / debian 12 / pbhoney / Honey.1.en
HONEY(1) General Commands Manual HONEY(1)

Honey - genomic structural variation discovery

Honey {subcommand}[options]

PBHoney is an implementation of two variant-identification approaches designed to exploit the high mappability of long reads (i.e., greater than 10,000 bp). PBHoney considers both intra-read discordance and soft-clipped tails of long reads to identify structural variants.

For a complete description, see the help menu

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blasr(1)
/usr/share/doc/pbhoney/HoneyReadme.txt

February 2016