pizzly ======
SYNOPSIS
DESCRIPTION
REQUIRED ARGUMENTS
- FUSION STRING
OPTIONS
-h, --help
- Display the help message.
--version-check BOOL
- Turn this option off to disable version update notifications of the
application. One of 1, ON, TRUE, T, YES, 0, OFF, FALSE, F, and NO.
Default: 1.
-k INTEGER
- k-mer size used in kallisto
-a, --align-score INTEGER
- Maximum number of mismatches allowed (default: 2)
-i, --insert-size INTEGER
- Maximum fragment size of library (default: 400)
-o, --output STRING
- Prefix for output files
-G, --gtf STRING
- Annotation in GTF format
-C, --cache STRING
- File for caching annotation (created if not present, otherwise reused from
previous runs)
-F, --fasta STRING
- Fasta reference
--ignore-protein
- Ignore any protein coding information in annotation
--version
- Display version information.
VERSION
- Last update: pizzly version: 0.37.3 SeqAn version: 2.4.0
SeqAn version: 2.4.0