gffutils-cli_create - Create a database
usage: gffutils-cli create [-h] [--output OUTPUT] [--force]
[--quiet]
- [--merge MERGE] [--disable-infer-genes]
- [--disable-infer-transcripts] filename
- Create a database.
- -h, --help
- show this help message and exit
- --output
OUTPUT
- Database to create. Default is to append ".db" to the end of the
input filename (default: -)
- --force
- Overwrite an existing database (default: False)
- --quiet
- Suppress the reporting of timing information when creating the database
(default: False)
- --merge
MERGE
- Merge strategy to be used if if duplicate IDs are found. (default:
'merge')
- --disable-infer-genes
- Disable inferring of gene extents for GTF files. Use this if your GTF file
already has "gene" featuretypes (default: False)
- --disable-infer-transcripts
- Disable inferring of transcript extents for GTF files. Use this if your
GTF file already has "transcript" featuretypes (default:
False)