pauvre - QC and genome browser plotting Oxford Nanopore and PacBio
long reads
usage: pauvre [-h] [-v]
- {browser,custommargin,marginplot,redwood,stats,synplot} ...
- {browser,custommargin,marginplot,redwood,stats,synplot}
- browser
- an adaptable genome browser with various track types
- custommargin
- plot custom marginal histograms of tab-delimited files
- marginplot
- plot a marginal histogram of a fastq file
- redwood
- make a redwood plot from a bam file
- stats
- outputs stats from a fastq file
- synplot
- make a synteny plot from a gff file, protein alignment, and partition
file
This manpage was written by Andreas Tille for the Debian
distribution and
can be used for any other usage of the program.