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Bio::Roary::InflateClusters(3pm) User Contributed Perl Documentation Bio::Roary::InflateClusters(3pm)

Bio::Roary::InflateClusters - Take the clusters file from cd-hit and use it to inflate the output of MCL

version 3.13.0

Take the clusters file from cd-hit and use it to inflate the output of MCL
use Bio::Roary::InflateClusters;

   my $obj = Bio::Roary::InflateClusters->new(
     clusters_filename  => 'example.clstr',
     mcl_filename       => 'example.mcl',
     output_file        => 'example.output'
   );
   $obj->inflate;

Andrew J. Page <ap13@sanger.ac.uk>

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

  The GNU General Public License, Version 3, June 2007
2019-11-08 perl v5.30.0